MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,506
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,580
Total number of protein coding genes annotated/found:
2,506
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5016|JADGMC010000001.1
SEQF5016_00969
Genome Viewer
NA
AA
1374/458
262783-264156
HTH-type transcriptional regulatory protein GabR
SEQF5016|JADGMC010000001.1
SEQF5016_00968
Genome Viewer
NA
AA
888/296
262685-261798
Pyridoxal 5'-phosphate synthase subunit PdxS
SEQF5016|JADGMC010000001.1
SEQF5016_00967
Genome Viewer
NA
AA
576/192
261796-261221
Pyridoxal 5'-phosphate synthase subunit PdxT
SEQF5016|JADGMC010000001.1
SEQF5016_00966
Genome Viewer
NA
AA
189/63
260918-261106
hypothetical protein
SEQF5016|JADGMC010000001.1
SEQF5016_00965
Genome Viewer
NA
AA
1215/405
259324-260538
Nucleoside permease NupC
SEQF5016|JADGMC010000001.1
SEQF5016_00964
Genome Viewer
NA
AA
462/154
259166-258705
Transcriptional regulator CtsR
SEQF5016|JADGMC010000001.1
SEQF5016_00963
Genome Viewer
NA
AA
558/186
258686-258129
Protein-arginine kinase activator protein
SEQF5016|JADGMC010000001.1
SEQF5016_00962
Genome Viewer
NA
AA
1011/337
258136-257126
Protein-arginine kinase
SEQF5016|JADGMC010000001.1
SEQF5016_00961
Genome Viewer
NA
AA
2472/824
257112-254641
ATP-dependent Clp protease ATP-binding subunit ClpC
SEQF5016|JADGMC010000001.1
SEQF5016_00960
Genome Viewer
NA
AA
1368/456
254110-252743
DNA repair protein RadA
SEQF5016|JADGMC010000001.1
SEQF5016_00959
Genome Viewer
NA
AA
1035/345
252651-251617
putative PIN and TRAM-domain containing protein YacL
SEQF5016|JADGMC010000001.1
SEQF5016_00958
Genome Viewer
NA
AA
1458/486
251239-249782
Glutamate--tRNA ligase
SEQF5016|JADGMC010000001.1
SEQF5016_00957
Genome Viewer
NA
AA
651/217
249481-248831
Serine acetyltransferase
SEQF5016|JADGMC010000001.1
SEQF5016_00956
Genome Viewer
NA
AA
1401/467
248847-247447
Cysteine--tRNA ligase
SEQF5016|JADGMC010000001.1
SEQF5016_00955
Genome Viewer
NA
AA
399/133
247454-247056
Mini-ribonuclease 3
SEQF5016|JADGMC010000001.1
SEQF5016_00954
Genome Viewer
NA
AA
750/250
247054-246305
Putative TrmH family tRNA/rRNA methyltransferase
SEQF5016|JADGMC010000001.1
SEQF5016_00953
Genome Viewer
NA
AA
528/176
246305-245778
putative protein YacP
SEQF5016|JADGMC010000001.1
SEQF5016_00952
Genome Viewer
NA
AA
579/193
245708-245130
hypothetical protein
SEQF5016|JADGMC010000001.1
SEQF5016_00951
Genome Viewer
NA
AA
180/60
244766-244587
Protein translocase subunit SecE
SEQF5016|JADGMC010000001.1
SEQF5016_00950
Genome Viewer
NA
AA
549/183
244572-244024
Transcription termination/antitermination protein NusG
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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